sRAP
This package is for version 3.6 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see sRAP.
Simplified RNA-Seq Analysis Pipeline
Bioconductor version: 3.6
This package provides a pipeline for gene expression analysis (primarily for RNA-Seq data). The normalization function is specific for RNA-Seq analysis, but all other functions (Quality Control Figures, Differential Expression and Visualization, and Functional Enrichment via BD-Func) will work with any type of gene expression data.
Author: Charles Warden
Maintainer: Charles Warden <cwarden45 at gmail.com>
citation("sRAP")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("sRAP")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("sRAP")
Details
See More
Package Archives
Follow Installation instructions to use this package in your R session.