To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TCGAMethylation450k")

In most cases, you don't need to download the package archive at all.

TCGAMethylation450k

DOI: 10.18129/B9.bioc.TCGAMethylation450k

The Cancer Genome Atlas Illumina 450k methylation example data

Bioconductor version: Release (3.5)

The Cancer Genome Atlas (TCGA) is applying genomics technologies to over 20 different types of cancer. This package contains a small set of 450k array data in idat format.

Author: Sean Davis

Maintainer: Sean Davis <sdavis2 at mail.nih.gov>

Citation (from within R, enter citation("TCGAMethylation450k")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TCGAMethylation450k")

Documentation

PDF Reference Manual

Details

biocViews CancerData, ExperimentData, Genome, MethylationArrayData
Version 1.12.0
License GPL-2
Depends
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me methylumi
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TCGAMethylation450k_1.12.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/TCGAMethylation450k
Package Short Url http://bioconductor.org/packages/TCGAMethylation450k/
Package Downloads Report Download Stats

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