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To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RTCGA.mutations")

In most cases, you don't need to download the package archive at all.

DOI: 10.18129/B9.bioc.RTCGA.mutations

Mutations datasets from The Cancer Genome Atlas Project

Bioconductor version: Release (3.5)

Package provides mutations datasets from The Cancer Genome Atlas Project for all cohorts types from http://gdac.broadinstitute.org/. Mutations data format is explained here https://wiki.nci.nih.gov/display/TCGA/Mutation+Annotation+Format+(MAF)+Specification. There is extra one column with patients' barcodes. Data from 2015年11月01日 snapshot.

Author: Marcin Kosinski <m.p.kosinski at gmail.com>

Maintainer: Marcin Kosinski <m.p.kosinski at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RTCGA.mutations")

Documentation

Details

Package Archives

Follow Installation instructions to use this package in your R session.

Source Repository git clone https://git.bioconductor.org/packages/RTCGA.mutations

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