To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GSE62944")

In most cases, you don't need to download the package archive at all.

GSE62944

DOI: 10.18129/B9.bioc.GSE62944

GEO accession data GSE62944 as a SummarizedExperiment

Bioconductor version: Release (3.5)

TCGA processed RNA-Seq data for 9264 tumor and 741 normal samples across 24 cancer types and made them available as GEO accession [GSE62944](http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE62944). GSE62944 data have been parsed into a SummarizedExperiment object available in ExperimentHub.

Author: Sonali Arora

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("GSE62944")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GSE62944")

Documentation

HTML R Script Raw TCGA data using Bioconductor's ExperimentHub
PDF Reference Manual

Details

biocViews DNASeqData, ExperimentData, Genome, RNASeqData
Version 1.4.0
License Artistic-2.0
Depends Biobase, GEOquery
Imports
LinkingTo
Suggests ExperimentHub(>= 0.99.6), knitr, BiocStyle
SystemRequirements
Enhances
URL http://bioconductor.org/packages/release/bioc/html/GSE62944.html
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GSE62944_1.4.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/GSE62944
Package Short Url http://bioconductor.org/packages/GSE62944/
Package Downloads Report Download Stats

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