To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("EGSEAdata")

In most cases, you don't need to download the package archive at all.

EGSEAdata

DOI: 10.18129/B9.bioc.EGSEAdata

Gene set collections for the EGSEA package

Bioconductor version: Release (3.5)

This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.

Author: Monther Alhamdoosh, Yifang Hu and Gordon K. Smyth

Maintainer: Monther Alhamdoosh <m.hamdoosh at gmail.com>

Citation (from within R, enter citation("EGSEAdata")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("EGSEAdata")

Documentation

PDF Reference Manual
Text NEWS
Text LICENSE

Details

biocViews ExperimentData, Homo_sapiens_Data, Mus_musculus_Data, Rattus_norvegicus_Data
Version 1.4.0
License file LICENSE
Depends R (>= 3.4)
Imports
LinkingTo
Suggests EGSEA
SystemRequirements
Enhances
URL
Depends On Me
Imports Me EGSEA
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EGSEAdata_1.4.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/EGSEAdata
Package Short Url http://bioconductor.org/packages/EGSEAdata/
Package Downloads Report Download Stats

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