To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pRolocGUI")

In most cases, you don't need to download the package archive at all.

pRolocGUI

DOI: 10.18129/B9.bioc.pRolocGUI

Interactive visualisation of spatial proteomics data

Bioconductor version: Release (3.5)

The package pRolocGUI comprises functions to interactively visualise organelle (spatial) proteomics data on the basis of pRoloc, pRolocdata and shiny.

Author: Lisa M Breckels, Thomas Naake and Laurent Gatto

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>, Lisa M Breckels <lms79 at cam.ac.uk>

Citation (from within R, enter citation("pRolocGUI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pRolocGUI")

Documentation

HTML R Script pRolocGUI - Interactive visualisation of spatial proteomics data
PDF Reference Manual
Text NEWS
Video pRoloc, pRolocdata and pRolocGUI

Details

biocViews GUI, Proteomics, Software, Visualization
Version 1.10.0
In Bioconductor since BioC 3.0 (R-3.1) (3 years)
License GPL-2
Depends methods, R (>= 3.1.0), pRoloc(>= 1.11.1), Biobase, MSnbase(>= 2.1.11)
Imports shiny (>= 0.9.1), scales, dplyr, DT (>= 0.1.40), graphics, utils, ggplot2
LinkingTo
Suggests pRolocdata, knitr, BiocStyle, rmarkdown
SystemRequirements
Enhances
URL http://ComputationalProteomicsUnit.github.io/pRolocGUI/
BugReports https://github.com/ComputationalProteomicsUnit/pRolocGUI/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package pRolocGUI_1.10.0.tar.gz
Windows Binary pRolocGUI_1.10.0.zip
Mac OS X 10.11 (El Capitan) pRolocGUI_1.10.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/pRolocGUI
Package Short Url http://bioconductor.org/packages/pRolocGUI/
Package Downloads Report Download Stats

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