To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("LiquidAssociation")

In most cases, you don't need to download the package archive at all.

LiquidAssociation

DOI: 10.18129/B9.bioc.LiquidAssociation

LiquidAssociation

Bioconductor version: Release (3.5)

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Author: Yen-Yi Ho <yho at jhsph.edu>

Maintainer: Yen-Yi Ho <yho at jhsph.edu>

Citation (from within R, enter citation("LiquidAssociation")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("LiquidAssociation")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("LiquidAssociation")
PDF R Script LiquidAssociation Vignette
PDF Reference Manual

Details

biocViews CellBiology, GeneExpression, Genetics, Network, Pathways, Software, TimeCourse
Version 1.30.0
In Bioconductor since BioC 2.5 (R-2.10) (8 years)
License GPL (>=3)
Depends geepack, methods, yeastCC, org.Sc.sgd.db
Imports Biobase, graphics, grDevices, methods, stats
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me fastLiquidAssociation
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package LiquidAssociation_1.30.0.tar.gz
Windows Binary LiquidAssociation_1.30.0.zip
Mac OS X 10.11 (El Capitan) LiquidAssociation_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/LiquidAssociation
Package Short Url http://bioconductor.org/packages/LiquidAssociation/
Package Downloads Report Download Stats

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