To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CONFESS")

In most cases, you don't need to download the package archive at all.

CONFESS

DOI: 10.18129/B9.bioc.CONFESS

Cell OrderiNg by FluorEScence Signal

Bioconductor version: Release (3.5)

Single Cell Fluidigm Spot Detector.

Author: Diana LOW and Efthimios MOTAKIS

Maintainer: Diana LOW <dlow at imcb.a-star.edu.sg>

Citation (from within R, enter citation("CONFESS")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CONFESS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("CONFESS")
PDF R Script CONFESS
HTML R Script CONFESS
PDF Reference Manual
Text NEWS

Details

biocViews CellBiology, Classification, Clustering, DataImport, GeneExpression, QualityControl, RNASeq, Regression, Software, TimeCourse, Visualization
Version 1.4.0
In Bioconductor since BioC 3.3 (R-3.3) (1.5 years)
License GPL-2
Depends R (>= 3.3), grDevices, utils, stats, graphics
Imports methods, changepoint, cluster, contrast, data.table (>= 1.9.7), ecp, EBImage, flexmix, flowCore, flowClust, flowMeans, flowMerge, flowPeaks, foreach, ggplot2, grid, limma, MASS, moments, outliers, parallel, plotrix, raster, readbitmap, reshape2, SamSPECTRAL, waveslim, wavethresh, zoo
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, CONFESSdata
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package CONFESS_1.4.0.tar.gz
Windows Binary CONFESS_1.4.0.zip
Mac OS X 10.11 (El Capitan) CONFESS_1.4.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/CONFESS
Package Short Url http://bioconductor.org/packages/CONFESS/
Package Downloads Report Download Stats

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