To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pcot2")
In most cases, you don't need to download the package archive at all.
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see pcot2.
Bioconductor version: 3.4
PCOT2 is a permutation-based method for investigating changes in the activity of multi-gene networks. It utilizes inter-gene correlation information to detect significant alterations in gene network activities. Currently it can be applied to two-sample comparisons.
Author: Sarah Song, Mik Black
Maintainer: Sarah Song <qson003 at stat.auckland.ac.nz>
Citation (from within R,
enter citation("pcot2")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pcot2")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pcot2")
Follow Installation instructions to use this package in your R session.
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