To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("nethet")

In most cases, you don't need to download the package archive at all.

nethet

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see nethet.

A bioconductor package for high-dimensional exploration of biological network heterogeneity

Bioconductor version: 3.4

Package nethet is an implementation of statistical solid methodology enabling the analysis of network heterogeneity from high-dimensional data. It combines several implementations of recent statistical innovations useful for estimation and comparison of networks in a heterogeneous, high-dimensional setting. In particular, we provide code for formal two-sample testing in Gaussian graphical models (differential network and GGM-GSA; Stadler and Mukherjee, 2013, 2014) and make a novel network-based clustering algorithm available (mixed graphical lasso, Stadler and Mukherjee, 2013).

Author: Nicolas Staedler, Frank Dondelinger

Maintainer: Nicolas Staedler <staedler.n at gmail.com>, Frank Dondelinger <fdondelinger.work at gmail.com>

Citation (from within R, enter citation("nethet")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("nethet")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("nethet")
PDF R Script nethet
PDF Reference Manual
Text NEWS

Details

Version 1.6.0
In Bioconductor since BioC 3.1 (R-3.2) (2 years)
License GPL-2
Depends
LinkingTo
Suggests knitr, xtable, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source nethet_1.6.0.tar.gz
Windows Binary nethet_1.6.0.zip (32- & 64-bit)
Mac OS X 10.9 (Mavericks) nethet_1.6.0.tgz
Package Downloads Report Download Stats

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