To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("meshr")

In most cases, you don't need to download the package archive at all.

meshr

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see meshr.

Tools for conducting enrichment analysis of MeSH

Bioconductor version: 3.4

A set of annotation maps describing the entire MeSH assembled using data from MeSH

Author: Itoshi Nikaido, Koki Tsuyuzaki, Gota Morota

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("meshr")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("meshr")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("meshr")
PDF R Script MeSH.db
PDF Reference Manual
Text NEWS

Details

biocViews Annotation, AnnotationData, Bioinformatics, FunctionalAnnotation, MeSHDb, MultipleComparisons, Software, Statistics
Version 1.10.0
In Bioconductor since BioC 2.14 (R-3.1) (3 years)
License Artistic-2.0
Depends R (>= 3.0.1), fdrtool, Category, BiocGenerics, methods, cummeRbund, org.Hs.eg.db, MeSH.db, MeSH.AOR.db, MeSH.PCR.db, MeSHDbi, MeSH.Hsa.eg.db, MeSH.Aca.eg.db, MeSH.Bsu.168.eg.db, MeSH.Syn.eg.db, S4Vectors
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source meshr_1.10.0.tar.gz
Windows Binary meshr_1.10.0.zip
Mac OS X 10.9 (Mavericks) meshr_1.10.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/meshr/tree/release-3.4
Package Short Url http://bioconductor.org/packages/meshr/
Package Downloads Report Download Stats

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