To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("limmaGUI")

In most cases, you don't need to download the package archive at all.

limmaGUI

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see limmaGUI.

GUI for limma package with two color microarrays

Bioconductor version: 3.4

A Graphical User Interface for differential expression analysis of two-color microarray data using the limma package.

Author: James Wettenhall [aut], Gordon Smyth [aut], Keith Satterley [ctb], Yifang Hu [ctb]

Maintainer: Yifang Hu <hu at wehi.edu.au>, Gordon Smyth <smyth at wehi.edu.au>, Keith Satterley <keith at wehi.edu.au>

Citation (from within R, enter citation("limmaGUI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("limmaGUI")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("limmaGUI")
PDF Extracting limma objects from limmaGUI files
PDF R Script limmaGUI Vignette
PDF LinModIntro.pdf
HTML about.html
HTML CustMenu.html
HTML import.html
HTML index.html
HTML InputFiles.html
HTML lgDevel.html
HTML windowsFocus.html
PDF Reference Manual

Details

biocViews BatchEffect, Bayesian, DataImport, DifferentialExpression, GUI, GeneExpression, Microarray, MultipleComparison, Normalization, Preprocessing, QualityControl, Regression, Software, TimeCourse, TwoChannel, mRNAMicroarray
Version 1.50.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 12 years)
License GPL (>=2)
Depends
Imports limma, tcltk, BiocInstaller, tkrplot, R2HTML, xtable, gcrma, AnnotationDbi
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://bioinf.wehi.edu.au/limmaGUI/
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source limmaGUI_1.50.0.tar.gz
Windows Binary limmaGUI_1.50.0.zip
Mac OS X 10.9 (Mavericks) limmaGUI_1.50.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/limmaGUI/tree/release-3.4
Package Short Url http://bioconductor.org/packages/limmaGUI/
Package Downloads Report Download Stats

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