To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("iCheck")

In most cases, you don't need to download the package archive at all.

iCheck

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see iCheck.

QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data

Bioconductor version: 3.4

QC pipeline and data analysis tools for high-dimensional Illumina mRNA expression data.

Author: Weiliang Qiu [aut, cre], Brandon Guo [aut, ctb], Christopher Anderson [aut, ctb], Barbara Klanderman [aut, ctb], Vincent Carey [aut, ctb], Benjamin Raby [aut, ctb]

Maintainer: Weiliang Qiu <stwxq at channing.harvard.edu>

Citation (from within R, enter citation("iCheck")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("iCheck")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("iCheck")
PDF R Script iCheck
PDF Reference Manual
Text NEWS

Details

biocViews DNAMethylation, DifferentialExpression, GeneExpression, Microarray, OneChannel, Preprocessing, QualityControl, Software, TwoChannel
Version 1.4.0
In Bioconductor since BioC 3.2 (R-3.2) (1.5 years)
License GPL (>= 2)
Depends R (>= 3.2.0), Biobase, lumi, gplots
Imports stats, graphics, preprocessCore, grDevices, randomForest, affy, limma, parallel, GeneSelectMMD, rgl, MASS, lmtest, scatterplot3d, utils
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source iCheck_1.4.0.tar.gz
Windows Binary iCheck_1.4.0.zip
Mac OS X 10.9 (Mavericks) iCheck_1.4.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/iCheck/tree/release-3.4
Package Short Url http://bioconductor.org/packages/iCheck/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

AltStyle によって変換されたページ (->オリジナル) /