To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("diggit")

In most cases, you don't need to download the package archive at all.

diggit

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see diggit.

Inference of Genetic Variants Driving Cellular Phenotypes

Bioconductor version: 3.4

Inference of Genetic Variants Driving Cellullar Phenotypes by the DIGGIT algorithm

Author: Mariano J Alvarez <reef103 at gmail.com>

Maintainer: Mariano J Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("diggit")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("diggit")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("diggit")
PDF R Script Using DIGGIT
PDF Reference Manual
Text NEWS
Text LICENSE

Details

Version 1.6.0
In Bioconductor since BioC 3.1 (R-3.2) (2 years)
License file LICENSE
Depends R (>= 3.0.2), Biobase, methods
Imports ks, viper(>= 1.3.1), parallel
LinkingTo
Suggests diggitdata
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source diggit_1.6.0.tar.gz
Windows Binary diggit_1.6.0.zip
Mac OS X 10.9 (Mavericks) diggit_1.6.0.tgz
Package Downloads Report Download Stats

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