To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SimBindProfiles")
In most cases, you don't need to download the package archive at all.
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see SimBindProfiles.
Bioconductor version: 3.4
SimBindProfiles identifies common and unique binding regions in genome tiling array data. This package does not rely on peak calling, but directly compares binding profiles processed on the same array platform. It implements a simple threshold approach, thus allowing retrieval of commonly and differentially bound regions between datasets as well as events of compensation and increased binding.
Author: Bettina Fischer, Enrico Ferrero, Robert Stojnic, Steve Russell
Maintainer: Bettina Fischer <bef22 at cam.ac.uk>
Citation (from within R,
enter citation("SimBindProfiles")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SimBindProfiles")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SimBindProfiles")
Follow Installation instructions to use this package in your R session.
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