RTCGA.clinical

This is the released version of RTCGA.clinical; for the devel version, see RTCGA.clinical.

Clinical datasets from The Cancer Genome Atlas Project

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DOI: 10.18129/B9.bioc.RTCGA.clinical

Bioconductor version: Release (3.22)

Package provides clinical datasets from The Cancer Genome Atlas Project for all cohorts types from http://gdac.broadinstitute.org/. Clinical data format is explained here https://wiki.nci.nih.gov/display/TCGA/Clinical+Data+Overview. Data from 2015年11月01日 snapshot.

Author: Marcin Kosinski <m.p.kosinski at gmail.com>

Maintainer: Marcin Kosinski <m.p.kosinski at gmail.com>

Citation (from within R, enter citation("RTCGA.clinical")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("RTCGA.clinical")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTCGA.clinical")

Using RTCGA to download clinical data as included in RTCGA.clinical HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Annotation Data, ExperimentData

Version 20151101.40.0

License GPL-2

Depends R (>= 3.2.0), RTCGA

Imports

System Requirements

URL

Bug Reports https://github.com/RTCGA/RTCGA/issues

Suggests rmarkdown, knitr

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me RTCGA, TDbasedUFEadv

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RTCGA.clinical_20151101.40.0.tar.gz

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macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/RTCGA.clinical

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RTCGA.clinical

Package Short Url https://bioconductor.org/packages/RTCGA.clinical/

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