MEDIPSData

This is the released version of MEDIPSData; for the devel version, see MEDIPSData.

Example data for MEDIPS and QSEA packages

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DOI: 10.18129/B9.bioc.MEDIPSData

Bioconductor version: Release (3.22)

Example data for MEDIPS and QSEA packages, consisting of chromosome 22 MeDIP and control/Input sample data. Additionally, the package contains MeDIP seq data from 3 NSCLC samples and adjacent normal tissue (chr 20-22). All data has been aligned to human genome hg19.

Author: Lukas Chavez

Maintainer: Lukas Chavez <lchavez at liai.org>

Citation (from within R, enter citation("MEDIPSData")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("MEDIPSData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, Genome, SequencingData

Version 1.46.0

License GPL (>= 2)

Depends R (>= 3.5)

Imports

System Requirements

URL

Suggests MEDIPS, GenomicRanges, qsea

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me MEDIPS, qsea

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MEDIPSData_1.46.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/MEDIPSData

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MEDIPSData

Package Short Url https://bioconductor.org/packages/MEDIPSData/

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