GSE103322

This is the released version of GSE103322; for the devel version, see GSE103322.

GEO accession data GSE103322 as a SingleCellExperiment

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DOI: 10.18129/B9.bioc.GSE103322

Bioconductor version: Release (3.22)

Single cell RNA-Seq data for 5902 cells from 18 patients with oral cavity head and neck squamous cell carcinoma available as GEO accession [GSE103322] (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE103322). GSE103322 data have been parsed into a SincleCellExperiment object available in ExperimentHub.

Author: Mariano Alvarez [aut, cre]

Maintainer: Mariano Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("GSE103322")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("GSE103322")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GSE103322")

scRNASeq HNSC data using Bioconductor's ExperimentHub HTML R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CancerData, DNASeqData, ExperimentData, ExperimentHub, ExpressionData, GEO, Genome, Homo_sapiens_Data, RNASeqData, SingleCellData

Version 1.16.0

License Artistic-2.0

Depends Biobase, GEOquery

Imports

System Requirements

URL

Suggests ExperimentHub(>= 0.99.6), knitr, BiocStyle, rmarkdown, SummarizedExperiment, SingleCellExperiment

Linking To

Enhances

Depends On Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GSE103322_1.16.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/GSE103322

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/GSE103322

Package Short Url https://bioconductor.org/packages/GSE103322/

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