ChAMPdata

This is the released version of ChAMPdata; for the devel version, see ChAMPdata.

Data Packages for ChAMP package

Bioconductor version: Release (3.22)

Provides datasets needed for ChAMP including a test dataset and blood controls for CNA analysis.

Author: Yuan Tian [ctb,aut], Tiffany Morris [cre,aut], Lee Stirling [ctb] and Andrew Teschendorff [ctb]

Maintainer: Yuan Tian <champ450k at gmail.com>

Citation (from within R, enter citation("ChAMPdata")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ChAMPdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Reference Manual PDF

biocViews ExperimentData

Version 2.42.0

License GPL-3

Depends R (>= 3.5.0), GenomicRanges(>= 1.22.4), BiocGenerics(>= 0.16.1)

Imports

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Depends On Me ChAMP, methyLImp2

Imports Me

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/ChAMPdata

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChAMPdata

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