COHCAPanno

This is the released version of COHCAPanno; for the devel version, see COHCAPanno.

Annotations for City of Hope CpG Island Analysis Pipeline

Bioconductor version: Release (3.22)

Provides genomic location, nearby CpG island and nearby gene information for common Illumina methylation array platforms

Author: Charles Warden

Maintainer: Charles Warden <cwarden45 at gmail.com>

Citation (from within R, enter citation("COHCAPanno")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("COHCAPanno")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("COHCAPanno")

COHCAPanno Vignette PDF R Script

Reference Manual PDF

Version 1.46.0

License GPL-3

Depends R (>= 2.10)

Imports

System Requirements

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/COHCAPanno

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/COHCAPanno

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