brgedata

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see brgedata.

Exposures, Gene Expression and Methylation data for ilustration purpouses

Bioconductor version: 3.21

This package contains several sets of omics data including Gene Expression (ExpressionSet), Methylation (GenomicRatioSet), Proteome and Exposome (ExposomeSet). This data is used in vignettes and exaples at MEAL, MultiDataSet and omicRexposome.

Author: Dolors Pelegri-Siso [aut, cre], Carlos Ruiz-Arenas [aut], Carles Hernandez-Ferrer [aut], Juan R. Gonzalez [aut]

Maintainer: Dolors Pelegri-Siso <dolors.pelegri at isglobal.org>

Citation (from within R, enter citation("brgedata")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("brgedata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("brgedata")

brgedata -- data R package with three omic data-set and exposome data-set from the same Spanish pupulation HTML R Script

Reference Manual PDF

LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData

Version 1.30.0

License MIT + file LICENSE

Depends R (>= 3.5.0), Biobase

Imports SummarizedExperiment

System Requirements

URL

Suggests minfi, MultiAssayExperiment, knitr, rmarkdown, rexposome, BiocStyle

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me MEAL, MultiDataSet, omicRexposome

Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package brgedata_1.30.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/brgedata

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/brgedata

Package Short Url https://bioconductor.org/packages/brgedata/

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