tenXplore

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see tenXplore.

ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics

Bioconductor version: 3.21

Perform ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics.

Author: Vince Carey

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("tenXplore")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("tenXplore")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("tenXplore")

tenXplore: ontology for scRNA-seq, applied to 10x 1.3 million neurons HTML R Script

Reference Manual PDF

Version 1.30.0

In Bioconductor since BioC 3.6 (R-3.4) (8 years)

License Artistic-2.0

Depends R (>= 4.0), shiny

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64) tenXplore_1.30.0.zip

macOS Binary (x86_64) tenXplore_1.30.0.tgz

macOS Binary (arm64) tenXplore_1.30.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/tenXplore

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/tenXplore

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