rqubic

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see rqubic.

Qualitative biclustering algorithm for expression data analysis in R

Bioconductor version: 3.21

This package implements the QUBIC algorithm introduced by Li et al. for the qualitative biclustering with gene expression data.

Author: Jitao David Zhang [aut, cre, ctb] ORCID iD ORCID: 0000-0002-3085-0909

Maintainer: Jitao David Zhang <jitao_david.zhang at roche.com>

Citation (from within R, enter citation("rqubic")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("rqubic")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rqubic")

Qualitative Biclustering with Bioconductor Package rqubic PDF R Script

Reference Manual PDF

NEWS Text

biocViews Clustering, Software

Version 1.54.0

In Bioconductor since BioC 2.9 (R-2.14) (14 years)

License GPL-2

Depends

Imports methods, Biobase, BiocGenerics, biclust

System Requirements

URL

Suggests RColorBrewer

Linking To

Enhances

Depends On Me

Imports Me miRSM

Suggests Me

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package rqubic_1.54.0.tar.gz

Windows Binary (x86_64) rqubic_1.54.0.zip (64-bit only)

macOS Binary (x86_64) rqubic_1.54.0.tgz

macOS Binary (arm64) rqubic_1.54.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/rqubic

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rqubic

Package Downloads Report Download Stats