riboSeqR

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see riboSeqR.

Analysis of sequencing data from ribosome profiling experiments

Bioconductor version: 3.21

Plotting functions, frameshift detection and parsing of sequencing data from ribosome profiling experiments.

Author: Thomas J. Hardcastle [aut], Samuel Granjeaud [cre] ORCID iD ORCID: 0000-0001-9245-1535

Maintainer: Samuel Granjeaud <samuel.granjeaud at inserm.fr>

Citation (from within R, enter citation("riboSeqR")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("riboSeqR")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("riboSeqR")

riboSeqR PDF R Script

Reference Manual PDF

NEWS Text

Version 1.42.0

In Bioconductor since BioC 3.0 (R-3.1) (11 years)

License GPL-3

Depends R (>= 3.0.2), methods, GenomicRanges, abind

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Follow Installation instructions to use this package in your R session.

Source Package riboSeqR_1.42.0.tar.gz

Windows Binary (x86_64) riboSeqR_1.42.0.zip (64-bit only)

macOS Binary (x86_64) riboSeqR_1.42.0.tgz

macOS Binary (arm64) riboSeqR_1.42.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/riboSeqR

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/riboSeqR

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