occugene

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see occugene.

Functions for Multinomial Occupancy Distribution

Bioconductor version: 3.21

Statistical tools for building random mutagenesis libraries for prokaryotes. The package has functions for handling the occupancy distribution for a multinomial and for estimating the number of essential genes in random transposon mutagenesis libraries.

Author: Oliver Will <oliverrreader at gmail.com>

Maintainer: Oliver Will <oliverrreader at gmail.com>

Citation (from within R, enter citation("occugene")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("occugene")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("occugene")

occugene PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Annotation, Pathways, Software

Version 1.68.0

In Bioconductor since BioC 2.2 (R-2.7) (17.5 years)

License GPL (>= 2)

Depends R (>= 2.0.0)

Imports

System Requirements

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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package occugene_1.68.0.tar.gz

Windows Binary (x86_64) occugene_1.68.0.zip

macOS Binary (x86_64) occugene_1.68.0.tgz

macOS Binary (arm64) occugene_1.68.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/occugene

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/occugene

Bioc Package Browser https://code.bioconductor.org/browse/occugene/

Package Short Url https://bioconductor.org/packages/occugene/

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