metaSeq

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see metaSeq.

Meta-analysis of RNA-Seq count data in multiple studies

Bioconductor version: 3.21

The probabilities by one-sided NOISeq are combined by Fisher's method or Stouffer's method

Author: Koki Tsuyuzaki, Itoshi Nikaido

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("metaSeq")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("metaSeq")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metaSeq")

metaSeq PDF R Script

Reference Manual PDF

Version 1.48.0

In Bioconductor since BioC 2.13 (R-3.0) (12 years)

License Artistic-2.0

Depends R (>= 2.13.0), NOISeq, snow, Rcpp

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Follow Installation instructions to use this package in your R session.

Source Package metaSeq_1.48.0.tar.gz

Windows Binary (x86_64) metaSeq_1.48.0.zip

macOS Binary (x86_64) metaSeq_1.48.0.tgz

macOS Binary (arm64) metaSeq_1.48.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/metaSeq

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/metaSeq

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