flowVS

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see flowVS.

Variance stabilization in flow cytometry (and microarrays)

Bioconductor version: 3.21

Per-channel variance stabilization from a collection of flow cytometry samples by Bertlett test for homogeneity of variances. The approach is applicable to microarrays data as well.

Author: Ariful Azad

Maintainer: Ariful Azad <azad at iu.edu>

Citation (from within R, enter citation("flowVS")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("flowVS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowVS")

flowVS: Cell population matching and meta-clustering in Flow Cytometry PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Microarray, Software

Version 1.40.0

In Bioconductor since BioC 3.1 (R-3.2) (10.5 years)

License Artistic-2.0

Depends R (>= 3.2), methods, flowCore, flowViz, flowStats

Imports

System Requirements

URL

Suggests knitr, vsn

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Depends On Me

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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowVS_1.40.0.tar.gz

Windows Binary (x86_64) flowVS_1.40.0.zip

macOS Binary (x86_64) flowVS_1.40.0.tgz

macOS Binary (arm64) flowVS_1.40.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/flowVS

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowVS

Bioc Package Browser https://code.bioconductor.org/browse/flowVS/

Package Short Url https://bioconductor.org/packages/flowVS/

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