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flowGate
This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see flowGate.
Interactive Cytometry Gating in R
Bioconductor version: 3.21
flowGate adds an interactive Shiny app to allow manual GUI-based gating of flow cytometry data in R. Using flowGate, you can draw 1D and 2D span/rectangle gates, quadrant gates, and polygon gates on flow cytometry data by interactively drawing the gates on a plot of your data, rather than by specifying gate coordinates. This package is especially geared toward wet-lab cytometerists looking to take advantage of R for cytometry analysis, without necessarily having a lot of R experience.
Author: Andrew Wight [aut, cre], Harvey Cantor [aut, ldr]
Maintainer: Andrew Wight <andrew.wight10 at gmail.com>
citation("flowGate")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowGate")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowGate")
Details
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Follow Installation instructions to use this package in your R session.