apComplex

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see apComplex.

Estimate protein complex membership using AP-MS protein data

Bioconductor version: 3.21

Functions to estimate a bipartite graph of protein complex membership using AP-MS data.

Author: Denise Scholtens <dscholtens at northwestern.edu>

Maintainer: Denise Scholtens <dscholtens at northwestern.edu>

Citation (from within R, enter citation("apComplex")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("apComplex")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("apComplex")

apComplex PDF R Script

Reference Manual PDF

Version 2.74.0

In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 20.5 years)

License LGPL

Depends R (>= 2.10), graph, RBGL

Imports Rgraphviz, stats, org.Sc.sgd.db

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64) apComplex_2.74.0.zip

macOS Binary (x86_64) apComplex_2.74.0.tgz

macOS Binary (arm64) apComplex_2.74.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/apComplex

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/apComplex

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