affyContam

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see affyContam.

structured corruption of affymetrix cel file data

Bioconductor version: 3.21

structured corruption of cel file data to demonstrate QA effectiveness

Author: V. Carey

Maintainer: V. Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("affyContam")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("affyContam")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("affyContam")

affy contamination tools PDF R Script

Reference Manual PDF

Version 1.66.0

In Bioconductor since BioC 2.3 (R-2.8) (17 years)

License Artistic-2.0

Depends R (>= 2.7.0), tools, methods, utils, Biobase, affy, affydata

Imports

System Requirements

URL

Suggests hgu95av2cdf

Linking To

Enhances

Depends On Me

Imports Me arrayMvout

Suggests Me

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64) affyContam_1.66.0.zip

macOS Binary (x86_64) affyContam_1.66.0.tgz

macOS Binary (arm64) affyContam_1.66.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/affyContam

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/affyContam

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