SharedObject

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see SharedObject.

Sharing R objects across multiple R processes without memory duplication

Bioconductor version: 3.21

This package is developed for facilitating parallel computing in R. It is capable to create an R object in the shared memory space and share the data across multiple R processes. It avoids the overhead of memory dulplication and data transfer, which make sharing big data object across many clusters possible.

Author: Jiefei Wang [aut, cre], Martin Morgan [aut]

Maintainer: Jiefei Wang <szwjf08 at gmail.com>

Citation (from within R, enter citation("SharedObject")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("SharedObject")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SharedObject")

quickStart HTML R Script

quickStartChinese HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Infrastructure, Software

Version 1.22.0

In Bioconductor since BioC 3.10 (R-3.6) (6 years)

License GPL-3

Depends R (>= 3.6.0)

Imports Rcpp, methods, stats, BiocGenerics

System Requirements GNU make, C++11

URL

Bug Reports https://github.com/Jiefei-Wang/SharedObject/issues

Suggests testthat, parallel, knitr, rmarkdown, BiocStyle

Linking To BH, Rcpp

Enhances

Depends On Me

Imports Me NewWave

Suggests Me ClustAssess

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SharedObject_1.22.0.tar.gz

Windows Binary (x86_64) SharedObject_1.22.0.zip

macOS Binary (x86_64) SharedObject_1.22.0.tgz

macOS Binary (arm64) SharedObject_1.22.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/SharedObject

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SharedObject

Bioc Package Browser https://code.bioconductor.org/browse/SharedObject/

Package Short Url https://bioconductor.org/packages/SharedObject/

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