- Home
- Bioconductor 3.21
- Software Packages
- Path2PPI
Path2PPI
This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see Path2PPI.
Prediction of pathway-related protein-protein interaction networks
Bioconductor version: 3.21
Package to predict protein-protein interaction (PPI) networks in target organisms for which only a view information about PPIs is available. Path2PPI predicts PPI networks based on sets of proteins which can belong to a certain pathway from well-established model organisms. It helps to combine and transfer information of a certain pathway or biological process from several reference organisms to one target organism. Path2PPI only depends on the sequence similarity of the involved proteins.
Author: Oliver Philipp [aut, cre], Ina Koch [ctb]
Maintainer: Oliver Philipp <contact at oliverphilipp.info>
citation("Path2PPI")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Path2PPI")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Path2PPI")
Details
See More
Package Archives
Follow Installation instructions to use this package in your R session.