MetID
This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see MetID.
Network-based prioritization of putative metabolite IDs
Bioconductor version: 3.21
This package uses an innovative network-based approach that will enhance our ability to determine the identities of significant ions detected by LC-MS.
Author: Zhenzhi Li <zzrickli at gmail.com>
Maintainer: Zhenzhi Li <zzrickli at gmail.com>
Citation (from within R, enter
citation("MetID")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MetID")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MetID") Reference Manual
PDF
Details
biocViews
AssayDomain, BiologicalQuestion, Infrastructure, KEGG, Network, ResearchField, Software, StatisticalMethod, Technology, WorkflowStep
Version
1.26.0
In Bioconductor since
BioC 3.8 (R-3.5) (7 years)
License
Artistic-2.0
Depends
R (>= 3.5)
Imports
utils (>= 3.3.1), stats (>= 3.4.2), devtools (>= 1.13.0), stringr (>= 1.3.0), Matrix (>= 1.2-12), igraph (>= 1.2.1), ChemmineR(>= 2.30.2)
System Requirements
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Build Report
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Package Archives
Follow Installation instructions to use this package in your R session.
Source Package
MetID_1.26.0.tar.gz
Windows Binary (x86_64)
MetID_1.26.0.zip
macOS Binary (x86_64)
MetID_1.26.0.tgz
macOS Binary (arm64)
MetID_1.26.0.tgz
Source Repository
git clone https://git.bioconductor.org/packages/MetID
Source Repository (Developer Access)
git clone git@git.bioconductor.org:packages/MetID
Bioc Package Browser
https://code.bioconductor.org/browse/MetID/
Package Short Url
https://bioconductor.org/packages/MetID/
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