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HuBMAPR
This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see HuBMAPR.
Interface to 'HuBMAP'
Bioconductor version: 3.21
'HuBMAP' provides an open, global bio-molecular atlas of the human body at the cellular level. The `datasets()`, `samples()`, `donors()`, `publications()`, and `collections()` functions retrieves the information for each of these entity types. `*_details()` are available for individual entries of each entity type. `*_derived()` are available for retrieving derived datasets or samples for individual entries of each entity type. Data files can be accessed using `bulk_data_transfer()`.
Author: Christine Hou [aut, cre] ORCID iD ORCID: 0009-0001-5350-0629 , Martin Morgan [aut] ORCID iD ORCID: 0000-0002-5874-8148 , Federico Marini [aut] ORCID iD ORCID: 0000-0003-3252-7758
Maintainer: Christine Hou <chris2018hou at gmail.com>
citation("HuBMAPR")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HuBMAPR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HuBMAPR")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.