FamAgg

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see FamAgg.

Pedigree Analysis and Familial Aggregation

Bioconductor version: 3.21

Framework providing basic pedigree analysis and plotting utilities as well as a variety of methods to evaluate familial aggregation of traits in large pedigrees.

Author: J. Rainer, D. Taliun, C.X. Weichenberger

Maintainer: Johannes Rainer <johannes.rainer at eurac.edu>

Citation (from within R, enter citation("FamAgg")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("FamAgg")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FamAgg")

Pedigree Analysis and Familial Aggregation HTML R Script

Reference Manual PDF

NEWS Text

LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Genetics, Software

Version 1.36.0

In Bioconductor since BioC 3.3 (R-3.3) (9.5 years)

License MIT + file LICENSE

Depends methods, kinship2, igraph

Imports gap (>= 1.1-17), Matrix, BiocGenerics, utils, survey

System Requirements

URL https://github.com/EuracBiomedicalResearch/FamAgg

Bug Reports https://github.com/EuracBiomedicalResearch/FamAgg/issues

Suggests BiocStyle, knitr, RUnit, rmarkdown

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package FamAgg_1.36.0.tar.gz

Windows Binary (x86_64) FamAgg_1.36.0.zip

macOS Binary (x86_64) FamAgg_1.36.0.tgz

macOS Binary (arm64) FamAgg_1.36.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/FamAgg

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FamAgg

Bioc Package Browser https://code.bioconductor.org/browse/FamAgg/

Package Short Url https://bioconductor.org/packages/FamAgg/

Package Downloads Report Download Stats