DegNorm

This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see DegNorm.

DegNorm: degradation normalization for RNA-seq data

Bioconductor version: 3.21

This package performs degradation normalization in bulk RNA-seq data to improve differential expression analysis accuracy.

Author: Bin Xiong and Ji-Ping Wang

Maintainer: Ji-Ping Wang <jzwang at northwestern.edu>

Citation (from within R, enter citation("DegNorm")):

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("DegNorm")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DegNorm")

DegNorm HTML R Script

Reference Manual PDF

NEWS Text

Version 1.18.0

In Bioconductor since BioC 3.12 (R-4.0) (5 years)

License LGPL (>= 3)

Depends R (>= 4.0.0), methods

System Requirements

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Follow Installation instructions to use this package in your R session.

Source Package DegNorm_1.18.0.tar.gz

Windows Binary (x86_64) DegNorm_1.18.0.zip

macOS Binary (x86_64) DegNorm_1.18.0.tgz

macOS Binary (arm64) DegNorm_1.18.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/DegNorm

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/DegNorm

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