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CGHnormaliter
This package is for version 3.21 of Bioconductor; for the stable, up-to-date release version, see CGHnormaliter.
Normalization of array CGH data with imbalanced aberrations.
Bioconductor version: 3.21
Normalization and centralization of array comparative genomic hybridization (aCGH) data. The algorithm uses an iterative procedure that effectively eliminates the influence of imbalanced copy numbers. This leads to a more reliable assessment of copy number alterations (CNAs).
Author: Bart P.P. van Houte, Thomas W. Binsl, Hannes Hettling
Maintainer: Bart P.P. van Houte <bvhoute at few.vu.nl>
citation("CGHnormaliter")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CGHnormaliter")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CGHnormaliter")
Details
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Follow Installation instructions to use this package in your R session.