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BSgenome.Mmusculus.UCSC.mm10
This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Mmusculus.UCSC.mm10.
Full genome sequences for Mus musculus (UCSC version mm10, based on GRCm38.p6)
Bioconductor version: 3.20
Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm10, based on GRCm38.p6) and stored in Biostrings objects.
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R, enter
citation("BSgenome.Mmusculus.UCSC.mm10")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BSgenome.Mmusculus.UCSC.mm10")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual
PDF
Details
Version
1.4.3
License
Artistic-2.0
Depends
R (>= 3.5.0), BSgenome(>= 1.60.0)
Imports
BSgenome
System Requirements
See More
Suggests
Linking To
Enhances
Depends On Me
BSgenome.Mmusculus.UCSC.mm10.masked
Suggests Me
AneuFinder, BSgenome, circRNAprofiler, cliProfiler, crisprDesign, CRISPRseek, enhancerHomologSearch, EpiCompare, factR, gcapc, GenomicRanges, GRaNIE, HiCDCPlus, InPAS, m6Aboost, MiRaGE, monaLisa, Motif2Site, multicrispr, NADfinder, periodicDNA, plyinteractions, scanMiRApp, scmeth, SCOPE, ICAMS
Links To Me
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package
BSgenome.Mmusculus.UCSC.mm10_1.4.3.tar.gz
Windows Binary (x86_64)
Package Short Url
https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm10/
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