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quantsmooth
This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see quantsmooth.
Quantile smoothing and genomic visualization of array data
Bioconductor version: 3.20
Implements quantile smoothing as introduced in: Quantile smoothing of array CGH data; Eilers PH, de Menezes RX; Bioinformatics. 2005 Apr 1;21(7):1146-53.
Author: Jan Oosting, Paul Eilers, Renee Menezes
Maintainer: Jan Oosting <j.oosting at lumc.nl>
Citation (from within R, enter
citation("quantsmooth")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("quantsmooth")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("quantsmooth") Reference Manual
PDF
Details
Version
1.72.0
In Bioconductor since
BioC 1.9 (R-2.4) (18.5 years)
License
GPL-2
Depends
R (>= 2.10.0), quantreg, grid
Imports
System Requirements
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Follow Installation instructions to use this package in your R session.
Source Package
quantsmooth_1.72.0.tar.gz
Windows Binary (x86_64)
quantsmooth_1.72.0.zip
macOS Binary (x86_64)
quantsmooth_1.72.0.tgz
macOS Binary (arm64)
quantsmooth_1.72.0.tgz
Source Repository
git clone https://git.bioconductor.org/packages/quantsmooth
Source Repository (Developer Access)
git clone git@git.bioconductor.org:packages/quantsmooth
Bioc Package Browser
https://code.bioconductor.org/browse/quantsmooth/
Package Short Url
https://bioconductor.org/packages/quantsmooth/
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