cleaver

This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see cleaver.

Cleavage of Polypeptide Sequences

Bioconductor version: 3.20

In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html

Author: Sebastian Gibb [aut, cre] ORCID iD ORCID: 0000-0001-7406-4443

Maintainer: Sebastian Gibb <mail at sebastiangibb.de>

Citation (from within R, enter citation("cleaver")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("cleaver")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cleaver")

In-silico cleavage of polypeptides HTML R Script

Reference Manual PDF

NEWS Text

biocViews Proteomics, Software

Version 1.44.0

In Bioconductor since BioC 2.13 (R-3.0) (11.5 years)

License GPL (>= 3)

Depends R (>= 3.0.0), methods, Biostrings(>= 1.29.8)

Imports S4Vectors, IRanges

System Requirements

Suggests testthat (>= 0.8), knitr, BiocStyle(>= 0.0.14), rmarkdown, BRAIN, UniProt.ws(>= 2.36.5)

Linking To

Enhances

Depends On Me

Imports Me ProteoDisco, synapter

Suggests Me RforProteomics

Links To Me

Build Report Build Report

Follow Installation instructions to use this package in your R session.

Source Package cleaver_1.44.0.tar.gz

Windows Binary (x86_64) cleaver_1.44.0.zip (64-bit only)

macOS Binary (x86_64) cleaver_1.44.0.tgz

macOS Binary (arm64) cleaver_1.44.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/cleaver

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/cleaver

Package Downloads Report Download Stats