To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pRolocGUI")

In most cases, you don't need to download the package archive at all.

pRolocGUI

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see pRolocGUI.

Interactive visualisation of spatial proteomics data

Bioconductor version: 3.2

The package pRolocGUI comprises functions to interactively visualise organelle (spatial) proteomics data on the basis of pRoloc, pRolocdata and shiny.

Author: Thomas Naake and Laurent Gatto, with contributions from Lisa M Breckels

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>, Thomas Naake <naake at stud.uni-heidelberg.de>

Citation (from within R, enter citation("pRolocGUI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pRolocGUI")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("pRolocGUI")
HTML pRolocVis and pRolocComp application
PDF Reference Manual
Text NEWS
Video pRoloc, pRolocdata and pRolocGUI

Details

biocViews GUI, Proteomics, Software, Visualization
Version 1.4.1
In Bioconductor since BioC 3.0 (R-3.1) (1.5 years)
License GPL-2
Depends R (>= 3.1.0), pRoloc(>= 1.5.12), MSnbase(>= 1.13.11), methods
Imports pRolocdata, shiny (>= 0.9.1), tools (>= 3.1.0), scales, DT
LinkingTo
Suggests RUnit, BiocGenerics, knitr, knitrBootstrap, bibtex, knitcitations (>= 1.0-1)
SystemRequirements
Enhances
URL http://ComputationalProteomicsUnit.github.io/pRolocGUI/
BugReports https://github.com/ComputationalProteomicsUnit/pRolocGUI/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source pRolocGUI_1.4.1.tar.gz
Windows Binary pRolocGUI_1.4.1.zip
Mac OS X 10.6 (Snow Leopard) pRolocGUI_1.4.0.tgz
Mac OS X 10.9 (Mavericks) pRolocGUI_1.4.1.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/pRolocGUI/tree/release-3.2
Package Short Url http://bioconductor.org/packages/pRolocGUI/
Package Downloads Report Download Stats

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