To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("lapmix")

In most cases, you don't need to download the package archive at all.

lapmix

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see lapmix.

Laplace Mixture Model in Microarray Experiments

Bioconductor version: 3.2

Laplace mixture modelling of microarray experiments. A hierarchical Bayesian approach is used, and the hyperparameters are estimated using empirical Bayes. The main purpose is to identify differentially expressed genes.

Author: Yann Ruffieux, contributions from Debjani Bhowmick, Anthony C. Davison, and Darlene R. Goldstein

Maintainer: Yann Ruffieux <yann.ruffieux at epfl.ch>

Citation (from within R, enter citation("lapmix")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("lapmix")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("lapmix")
PDF lapmix example
PDF Reference Manual

Details

biocViews DifferentialExpression, Microarray, OneChannel, Software
Version 1.36.0
In Bioconductor since BioC 1.9 (R-2.4) (9.5 years)
License GPL (>= 2)
Depends R (>= 2.6.0), stats
Imports Biobase, graphics, grDevices, methods, stats, tools, utils
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SystemRequirements
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URL http://www.r-project.org http://www.bioconductor.org http://stat.epfl.ch
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Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source lapmix_1.36.0.tar.gz
Windows Binary lapmix_1.36.0.zip
Mac OS X 10.6 (Snow Leopard) lapmix_1.36.0.tgz
Mac OS X 10.9 (Mavericks) lapmix_1.36.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/lapmix/tree/release-3.2
Package Short Url http://bioconductor.org/packages/lapmix/
Package Downloads Report Download Stats

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