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This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see casper.
Bioconductor version: 3.2
Infer alternative splicing from paired-end RNA-seq data. The model is based on counting paths across exons, rather than pairwise exon connections, and estimates the fragment size and start distributions non-parametrically, which improves estimation precision.
Author: David Rossell, Camille Stephan-Otto, Manuel Kroiss, Miranda Stobbe, Victor Pena
Maintainer: David Rossell <rosselldavid at gmail.com>
Citation (from within R,
enter citation("casper")):
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## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("casper")
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