To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SISPA")

In most cases, you don't need to download the package archive at all.

SISPA

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see SISPA.

SISPA: Method for Sample Integrated Set Profile Analysis

Bioconductor version: 3.2

Sample Integrated Gene Set Analysis (SISPA) is a method designed to define sample groups with similar gene set enrichment profiles.

Author: Bhakti Dwivedi Ph.D. & Jeanne Kowalski Ph.D.

Maintainer: Bhakti Dwivedi <bhakti.dwivedi at emory.edu>

Citation (from within R, enter citation("SISPA")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SISPA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("SISPA")
HTML replace me with the vignette title
PDF Reference Manual
Text NEWS

Details

biocViews GeneSetEnrichment, GenomeWideAssociation, Software
Version 1.0.0
In Bioconductor since BioC 3.2 (R-3.2) (0.5 years)
License GPL-2
Depends R (>= 3.2), GSVA, changepoint, data.table, ggplot2, plyr
Imports
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source SISPA_1.0.0.tar.gz
Windows Binary SISPA_1.0.0.zip
Mac OS X 10.6 (Snow Leopard) SISPA_1.0.0.tgz
Mac OS X 10.9 (Mavericks) SISPA_1.0.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/SISPA/tree/release-3.2
Package Short Url http://bioconductor.org/packages/SISPA/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

AltStyle によって変換されたページ (->オリジナル) /