multiWGCNAdata

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see multiWGCNAdata.

Data Package for multiWGCNA

Bioconductor version: 3.19

Stores expression profiling data from experiments compatible with the multiWGCNA R package. This includes human postmortem microarray data from patients and controls (GSE28521), astrocyte Ribotag RNA-seq data from EAE and wildtype mice (GSE100329), and mouse RNA-seq data from tau pathology (rTg4510) and wildtype control mice (GSE125957). These data can be accessed using the ExperimentHub workflow (see multiWGCNA vignettes).

Author: Dario Tommasini [aut, cre]

Maintainer: Dario Tommasini <dtommasini0 at gmail.com>

Citation (from within R, enter citation("multiWGCNAdata")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("multiWGCNAdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("multiWGCNAdata")

Loading data through ExperimentHub HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, MicroarrayData, Mus_musculus_Data, RNASeqData

Version 1.2.0

License Artistic-2.0

Depends ExperimentHub

Imports utils

System Requirements

URL

Suggests BiocStyle, knitr, multiWGCNA, rmarkdown, SummarizedExperiment

Linking To

Enhances

Depends On Me

Imports Me

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Links To Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package multiWGCNAdata_1.2.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/multiWGCNAdata

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/multiWGCNAdata

Package Short Url https://bioconductor.org/packages/multiWGCNAdata/

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