marinerData

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see marinerData.

ExperimentHub data for the mariner package

Bioconductor version: 3.19

Subsampled Hi-C in HEK cells expressing the NHA9 fusion with an F to S mutated IDR ("FS") or without any mutations to the IDR ("Wildtype" or "WT"). These files are used for testing mariner functions and some examples.

Author: Eric Davis [aut, cre]

Maintainer: Eric Davis <ericscottdavis at outlook.com>

Citation (from within R, enter citation("marinerData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("marinerData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("marinerData")

marinerData package HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, ExperimentHub, SequencingData

Version 1.4.0

License GPL-3

Depends

Imports utils, ExperimentHub

System Requirements

URL

Bug Reports https://support.bioconductor.org/t/marinerData

Suggests knitr, rmarkdown, ExperimentHubData, testthat (>= 3.0.0)

Linking To

Enhances

Depends On Me

Imports Me

Suggests Me mariner

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package marinerData_1.4.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/marinerData

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/marinerData

Package Short Url https://bioconductor.org/packages/marinerData/

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