geneLenDataBase

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see geneLenDataBase.

Lengths of mRNA transcripts for a number of genomes

Bioconductor version: 3.19

Length of mRNA transcripts for a number of genomes and gene ID formats, largely based on UCSC table browser.

Author: Matthew Young

Maintainer: Matthew Young <my4 at sanger.ac.uk>, Nadia Davidson <nadia.davidson at mcri.edu.au>

Citation (from within R, enter citation("geneLenDataBase")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("geneLenDataBase")

For older versions of R, please refer to the appropriate Bioconductor release.

Reference Manual PDF

Version 1.40.1

License LGPL (>= 2)

Depends R (>= 2.11.0)

Imports utils, rtracklayer, GenomicFeatures(>= 1.56.0), txdbmaker

System Requirements

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Depends On Me goseq

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64)

macOS Binary (x86_64)

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Source Repository git clone https://git.bioconductor.org/packages/geneLenDataBase

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geneLenDataBase

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