TimerQuant

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see TimerQuant.

Timer Quantification

Bioconductor version: 3.19

Supplementary Data package for tandem timer methods paper by Barry et al. (2015) including TimerQuant shiny applications.

Author: Joseph Barry

Maintainer: Joseph Barry <joseph.barry at embl.de>

Citation (from within R, enter citation("TimerQuant")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("TimerQuant")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TimerQuant")

Supplementary Methods - automatic generation of paper figures PDF R Script

Supplementary Methods - mathematical derivations PDF R Script

Reference Manual PDF

Version 1.34.0

License Artistic-2.0

Depends shiny

System Requirements

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Depends On Me

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/TimerQuant

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TimerQuant

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