ObMiTi

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see ObMiTi.

Ob/ob Mice Data on Normal and High Fat Diet

Bioconductor version: 3.19

The package provide RNA-seq count for 2 strains of mus musclus; Wild type and Ob/Ob. Each strain was divided into two groups, and each group received either chow diet or high fat diet. RNA expression was measured after 20 weeks in 7 tissues.

Author: Omar Elashkar [aut, cre] , Mahmoud Ahmed [aut]

Maintainer: Omar Elashkar <omar.i.elashkar at gmail.com>

Citation (from within R, enter citation("ObMiTi")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("ObMiTi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ObMiTi")

Using ObMiTi HTML R Script

Reference Manual PDF

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, ExperimentHub, GEO, RNASeqData

Version 1.12.0

License GPL-3

Depends R (>= 4.1), SummarizedExperiment, ExperimentHub

Imports

System Requirements

URL https://github.com/OmarElAshkar/ObMiTi

Bug Reports https://github.com/OmarElAshkar/ObMiTi/issues

Suggests knitr, rmarkdown, BiocManager, GenomicFeatures, S4Vectors, devtools, testthat

Linking To

Enhances

Depends On Me

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ObMiTi_1.12.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/ObMiTi

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ObMiTi

Package Short Url https://bioconductor.org/packages/ObMiTi/

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