NetActivityData

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see NetActivityData.

Data required for getting the gene set scores with NetActivity package

Bioconductor version: 3.19

This package contains the weights from pre-trained shallow sparsely-connected autoencoders. This data is required for getting the gene set scores with NetActivity package.

Author: Carlos Ruiz-Arenas [aut, cre]

Maintainer: Carlos Ruiz-Arenas <carlos.ruiza at upf.edu>

Citation (from within R, enter citation("NetActivityData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("NetActivityData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("NetActivityData")

NetActivityData HTML R Script

Reference Manual PDF

NEWS Text

LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, RepositoryData

Version 1.6.0

License MIT + file LICENSE

Depends R (>= 4.2.0)

Imports

System Requirements

URL

Suggests BiocStyle, knitr

Linking To

Enhances

Depends On Me

Imports Me NetActivity

Suggests Me

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package NetActivityData_1.6.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Source Repository git clone https://git.bioconductor.org/packages/NetActivityData

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/NetActivityData

Package Short Url https://bioconductor.org/packages/NetActivityData/

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